Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DYE50_09705 | Not Available | + | 2244621 - 2245256 | 24375.9 |
| outer membrane lipoprotein-sorting protein | DYE50_09710 | O83768 | + | 2245268 - 2246056 | 29476.0 |
| anti-sigma factor antagonist | DYE50_09715 | Q7WLU9 | + | 2246065 - 2247255 | 44295.4 |
| carboxynorspermidine decarboxylase | DYE50_09720 | A8FNH9 | + | 2247272 - 2248417 | 42891.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DYE50_09725 | Not Available | + | 2248410 - 2249540 | 43766.1 |
| hypothetical protein | DYE50_09730 | P0C061 | + | 2249524 - 2252583 | 116356.0 |
| hypothetical protein | DYE50_09735 | Not Available | - | 2252580 - 2254298 | 64014.2 |
| 30s ribosomal protein s16 | DYE50_09740 | B0K9W7 | + | 2254471 - 2254725 | 9701.76 |
| kh domain-containing protein | DYE50_09745 | O83876 | + | 2254746 - 2254979 | 8329.95 |
| 16s rrna processing protein rimm | DYE50_09750 | Q73PB6 | + | 2255017 - 2255589 | 21291.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
