Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DYE50_09655 | Q9WYT5 | + | 2231152 - 2232024 | 33087.9 |
| hybrid sensor histidine kinase/response regulator | DYE50_09660 | O25153 | + | 2232017 - 2234116 | 79192.1 |
| adenylate/guanylate cyclase domain-containing response regulator | DYE50_09665 | P40137 | + | 2234132 - 2235979 | 68686.2 |
| abc transporter atp-binding protein | DYE50_09670 | P42065 | + | 2235996 - 2236961 | 36381.6 |
| na+/h+ antiporter nhac family protein | DYE50_09675 | P44263 | + | 2237200 - 2238708 | 53199.9 |
| lactate utilization protein | DYE50_09680 | Not Available | + | 2238717 - 2239286 | 20398.6 |
| rlua family pseudouridine synthase | DYE50_09685 | P54604 | + | 2239443 - 2240429 | 36481.1 |
| hypothetical protein | DYE50_09690 | Not Available | + | 2240502 - 2241869 | 50814.5 |
| rnd transporter | DYE50_09695 | O88022 | + | 2241884 - 2244244 | 87351.3 |
| hypothetical protein | DYE50_09700 | Not Available | + | 2244269 - 2244508 | 9111.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
