Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DYE50_09605 | P42062 | + | 2218234 - 2219352 | 41488.9 |
| atp-binding cassette domain-containing protein | DYE50_09610 | P24136 | + | 2219354 - 2221540 | 80373.2 |
| ribose-phosphate pyrophosphokinase | DYE50_09615 | Q87RN8 | + | 2221652 - 2222743 | 41026.5 |
| hypothetical protein | DYE50_09620 | Q59017 | - | 2222767 - 2223906 | 41983.5 |
| hypothetical protein | DYE50_09625 | P43500 | + | 2224011 - 2225534 | 56145.0 |
| methyl-accepting chemotaxis protein | DYE50_09630 | Q0VTI9 | + | 2225550 - 2227322 | 64957.6 |
| methyl-accepting chemotaxis protein | DYE50_09635 | P43500 | + | 2227335 - 2229155 | 67062.8 |
| hypothetical protein | DYE50_09640 | O25152 | + | 2229158 - 2229661 | 18855.6 |
| hypothetical protein | DYE50_09645 | Not Available | + | 2229648 - 2230151 | 18738.9 |
| response regulator | DYE50_09650 | Q1BRL2 | + | 2230154 - 2231155 | 36016.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
