Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | DYE50_09505 | P31851 | + | 2198231 - 2199499 | 47395.9 |
| s1 rna-binding domain-containing protein | DYE50_09510 | Q9JZ44 | - | 2199598 - 2200710 | 40566.9 |
| histidine phosphatase family protein | DYE50_09515 | Q11CB5 | - | 2200855 - 2201433 | 21732.9 |
| hypothetical protein | DYE50_09520 | Not Available | + | 2201562 - 2202686 | 41234.1 |
| hypothetical protein | DYE50_09525 | Not Available | + | 2202905 - 2204017 | 39612.5 |
| hypothetical protein | DYE50_09530 | Not Available | + | 2204103 - 2204900 | 29957.3 |
| hypothetical protein | DYE50_09535 | Not Available | - | 2205262 - 2206494 | 43016.3 |
| hypothetical protein | DYE50_09540 | Not Available | - | 2206678 - 2207424 | 28725.2 |
| hypothetical protein | DYE50_09545 | Not Available | - | 2207689 - 2207910 | 8705.64 |
| hypothetical protein | DYE50_09550 | Not Available | - | 2207957 - 2208265 | 11312.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
