Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | DYE50_09455 | Q6MDD9 | - | 2182593 - 2183507 | 32500.5 |
| 6-carboxyhexanoate--coa ligase | DYE50_09460 | D3E0R7 | + | 2183758 - 2184492 | 26731.9 |
| dethiobiotin synthase | DYE50_09465 | C0QVL9 | + | 2184489 - 2185181 | 25124.4 |
| pyridoxal phosphate-dependent aminotransferase family protein | DYE50_09470 | Q65ML1 | + | 2185178 - 2186359 | 42606.4 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DYE50_09475 | P12995 | + | 2186356 - 2187540 | 45026.5 |
| hypothetical protein | DYE50_09480 | Not Available | - | 2187575 - 2191681 | 152142.0 |
| hypothetical protein | DYE50_09485 | Not Available | - | 2191742 - 2193622 | 69463.0 |
| mannose-6-phosphate isomerase | DYE50_09490 | Q59935 | - | 2193941 - 2194747 | 29852.6 |
| hypothetical protein | DYE50_09495 | Not Available | - | 2194747 - 2195676 | 34579.0 |
| ggdef domain-containing protein | DYE50_09500 | P74101 | - | 2195695 - 2197944 | 87691.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
