Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | DYE50_09305 | Q54PA9 | + | 2149306 - 2150571 | 47103.7 |
| hypothetical protein | DYE50_09310 | A1JJ57 | + | 2150683 - 2151741 | 37861.2 |
| had family hydrolase | DYE50_09315 | Q9K6Y7 | + | 2151747 - 2152406 | 24451.4 |
| Trna-arg | Not Available | Not Available | + | 2152647 - 2152720 | Not Available |
| dna recombination protein rmuc | DYE50_09325 | Q9PG89 | - | 2152718 - 2153596 | 32741.5 |
| duf4954 family protein | DYE50_09330 | O83823 | + | 2153668 - 2155833 | 82574.2 |
| 2-isopropylmalate synthase | DYE50_09335 | Q97MC5 | + | 2156004 - 2157674 | 61375.0 |
| insulinase family protein | DYE50_09340 | P55679 | + | 2157797 - 2159320 | 56891.9 |
| insulinase family protein | DYE50_09345 | P55680 | + | 2159332 - 2160729 | 50980.0 |
| hypothetical protein | DYE50_09350 | Not Available | - | 2160818 - 2161636 | 30692.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
