Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DYE50_09205 | P80387 | + | 2120109 - 2122448 | 85267.7 |
| hypothetical protein | DYE50_09210 | Not Available | + | 2122473 - 2123849 | 48492.6 |
| hypothetical protein | DYE50_09215 | P21543 | + | 2123920 - 2127195 | 121648.0 |
| hypothetical protein | DYE50_09220 | O33840 | + | 2127231 - 2129867 | 95244.9 |
| glycosyl hydrolase family 88 | DYE50_09225 | O34559 | + | 2130023 - 2131270 | 47493.6 |
| laccase domain-containing protein | DYE50_09230 | P33664 | - | 2131279 - 2132118 | 31261.4 |
| hypothetical protein | DYE50_09235 | O83148 | - | 2132149 - 2133852 | 65615.0 |
| 3-isopropylmalate dehydrogenase | DYE50_09240 | Q97EE2 | - | 2133982 - 2135076 | 39488.6 |
| flavin reductase family protein | DYE50_09245 | Q9KIT1 | + | 2135270 - 2135824 | 20348.0 |
| carbohydrate abc transporter substrate-binding protein | DYE50_09250 | Q7LYW7 | + | 2135994 - 2137286 | 47632.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
