Treponema ruminis Ru1

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Treponematales

Family

Treponemataceae

Genus

Treponema

Description

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderTreponematales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema ruminis
StrainRu1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema ruminis Ru1

Accession NumberCP031518.1

Gene Summary

Adenine Count

801950 bp

Thymine Count

801060 bp

Guanine Count

651183 bp

Cytosine Count

641389 bp

Genome Length

2895582 bp

Protein-coding Genes

2454 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
serine proteaseDYE50_09155A6VUA4+2104444 - 210607259894.7
elongation factor 4DYE50_09160P60794+2106145 - 210794767630.3
duf115 domain-containing proteinDYE50_09165O83900-2107928 - 210967364253.4
hypothetical proteinDYE50_09170O51068-2109686 - 211117054667.7
alpha-glycosidaseDYE50_09175A0A7U9P668+2111383 - 211317069503.4
arac family transcriptional regulatorDYE50_09180P96660+2113244 - 211421237618.8
alpha-amylaseDYE50_09185P20845-2114251 - 211591262063.2
sugar abc transporter permeaseDYE50_09190O06991-2115912 - 211676331616.4
sugar abc transporter permeaseDYE50_09195O32261-2116763 - 211821454130.0
maltose abc transporter substrate-binding proteinDYE50_09200O07009-2118371 - 211957644135.4

Displaying genes 1831 – 1840 of 2525 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites