Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | DYE50_09105 | Q8DY32 | + | 2096127 - 2096705 | 21492.7 |
| lytr family transcriptional regulator | DYE50_09110 | P96499 | + | 2096709 - 2097911 | 44535.2 |
| ribosome silencing factor | DYE50_09115 | Q02SH2 | + | 2097920 - 2098264 | 13019.3 |
| hypothetical protein | DYE50_09120 | Not Available | - | 2098341 - 2098595 | 9752.28 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DYE50_09125 | Q73N18 | + | 2098752 - 2099618 | 31240.3 |
| septation protein spovg | DYE50_09130 | A7FPK3 | + | 2099663 - 2099941 | 10250.1 |
| Trna-gln | Not Available | Not Available | + | 2099986 - 2100058 | Not Available |
| 50s ribosomal protein l25 | DYE50_09140 | Q73N16 | + | 2100170 - 2100721 | 20024.3 |
| trna lysidine(34) synthetase tils | DYE50_09145 | Q73N15 | + | 2100784 - 2102223 | 53616.2 |
| hypothetical protein | DYE50_09150 | O83389 | + | 2102262 - 2104382 | 78923.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
