Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adenine deaminase | DYE50_08955 | Q6ANH1 | + | 2063965 - 2065707 | 63187.4 |
| sodium pump decarboxylase subunit gamma | DYE50_08960 | Not Available | + | 2065891 - 2066127 | 8254.41 |
| oxaloacetate decarboxylase subunit alpha | DYE50_08965 | Q8XGX8 | + | 2066141 - 2068183 | 71918.2 |
| sodium ion-translocating decarboxylase subunit beta | DYE50_08970 | P13156 | + | 2068202 - 2069659 | 51070.2 |
| duf4230 domain-containing protein | DYE50_08975 | Not Available | - | 2069750 - 2070400 | 24236.9 |
| hypothetical protein | DYE50_08980 | Not Available | + | 2070455 - 2071096 | 24382.4 |
| flagellar protein flbb | DYE50_08985 | Not Available | + | 2071163 - 2071795 | 23588.3 |
| hypothetical protein | DYE50_08990 | Not Available | + | 2071942 - 2073399 | 52938.8 |
| flagellar hook assembly protein flgd | DYE50_08995 | P23455 | + | 2073470 - 2073937 | 17275.6 |
| flagellar hook protein flge | DYE50_09000 | Q56326 | + | 2073962 - 2075353 | 49397.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
