Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | DYE50_08855 | Q57951 | + | 2042251 - 2042754 | 18700.8 |
| laci family transcriptional regulator | DYE50_08860 | B7VMG4 | + | 2042823 - 2043836 | 37514.4 |
| carbohydrate abc transporter substrate-binding protein | DYE50_08865 | Q55471 | + | 2043886 - 2045193 | 48635.4 |
| sugar abc transporter permease | DYE50_08870 | Q55472 | + | 2045251 - 2046342 | 39979.9 |
| carbohydrate abc transporter permease | DYE50_08875 | Q55473 | + | 2046339 - 2047250 | 33162.3 |
| amylosucrase | DYE50_08880 | Q9ZEU2 | + | 2047255 - 2049075 | 69901.3 |
| beta-phosphoglucomutase | DYE50_08885 | Q8L164 | + | 2049111 - 2052077 | 110632.0 |
| carbohydrate kinase | DYE50_08890 | Q9LNE3 | + | 2052079 - 2053044 | 34503.1 |
| aspartate kinase | DYE50_08895 | Q9LYU8 | + | 2053115 - 2054437 | 48059.1 |
| hypothetical protein | DYE50_08900 | Q979Z2 | + | 2054485 - 2055621 | 42496.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
