Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | DYE50_08755 | P15885 | - | 2019822 - 2022647 | 103612.0 |
| arac family transcriptional regulator | DYE50_08760 | O31456 | - | 2022678 - 2023430 | 29216.1 |
| sugar abc transporter permease | DYE50_08765 | P29823 | + | 2023666 - 2024616 | 35807.7 |
| carbohydrate abc transporter permease | DYE50_08770 | P94530 | + | 2024613 - 2025443 | 31044.3 |
| hypothetical protein | DYE50_08775 | Not Available | + | 2025528 - 2028206 | 98218.6 |
| hypothetical protein | DYE50_08780 | Not Available | + | 2028334 - 2029347 | 37701.8 |
| 4fe-4s cluster-binding domain-containing protein | DYE50_08785 | Q58036 | - | 2029340 - 2030290 | 35340.9 |
| phosphoglycerate kinase | DYE50_08790 | P62421 | + | 2030399 - 2031670 | 45057.8 |
| triose-phosphate isomerase | DYE50_08795 | Q73NB9 | - | 2031789 - 2032547 | 27044.5 |
| preprotein translocase subunit secg | DYE50_08800 | O83547 | + | 2032774 - 2033190 | 14140.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
