Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lamb/ycsf family protein | DYE50_08705 | A6LX30 | + | 2009057 - 2009815 | 27329.4 |
| branched-chain amino acid abc transporter substrate-binding protein | DYE50_08710 | P21175 | + | 2010072 - 2011238 | 42316.7 |
| branched-chain amino acid abc transporter permease | DYE50_08715 | P21627 | + | 2011321 - 2012232 | 32665.4 |
| branched-chain amino acid abc transporter permease | DYE50_08720 | P22729 | + | 2012320 - 2013366 | 37229.9 |
| abc transporter atp-binding protein | DYE50_08725 | P21629 | + | 2013363 - 2014175 | 30380.8 |
| abc transporter atp-binding protein | DYE50_08730 | P0A192 | + | 2014187 - 2014927 | 27701.0 |
| hypothetical protein | DYE50_08735 | P44298 | + | 2014938 - 2016626 | 60766.6 |
| putative hydro-lyase | DYE50_08740 | A6LX31 | + | 2016638 - 2017432 | 29206.1 |
| alanine racemase | DYE50_08745 | Q73NQ7 | + | 2017441 - 2018598 | 42951.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DYE50_08750 | Q59309 | - | 2018667 - 2019716 | 37359.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
