Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional metallophosphatase/5'-nucleotidase | DYE50_08605 | F8S0Z7 | - | 1989708 - 1991438 | 63068.9 |
| plp-dependent transferase | DYE50_08610 | O05394 | - | 1991552 - 1992718 | 42496.9 |
| rrf2 family transcriptional regulator | DYE50_08615 | O34527 | - | 1992768 - 1993193 | 15981.9 |
| nitrogenase iron protein | DYE50_08620 | P22548 | + | 1993348 - 1994199 | 31045.5 |
| 3-deoxy-7-phosphoheptulonate synthase | DYE50_08625 | Q9WYH8 | - | 1994334 - 1995347 | 36924.0 |
| hypothetical protein | DYE50_08630 | Not Available | - | 1995344 - 1995574 | 9097.51 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DYE50_08635 | Q73JV7 | - | 1995723 - 1996763 | 37289.1 |
| hypothetical protein | DYE50_08640 | P37691 | - | 1996776 - 1998146 | 50046.9 |
| hypothetical protein | DYE50_08645 | P77994 | - | 1998204 - 1999028 | 31413.0 |
| bifunctional phosphoserine phosphatase/homoserine phosphotransferase thrh | DYE50_08650 | Q9I2Y2 | + | 1999517 - 2000125 | 22819.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
