Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | DYE50_08555 | Q9ZDG2 | + | 1978411 - 1979355 | 33122.9 |
| dmt family transporter | DYE50_08560 | O31448 | + | 1979453 - 1980409 | 35488.2 |
| rlua family pseudouridine synthase | DYE50_08565 | P44782 | - | 1980406 - 1981920 | 56276.3 |
| hypothetical protein | DYE50_08570 | Not Available | + | 1982044 - 1982352 | 11124.5 |
| trna glutamyl-q(34) synthetase gluqrs | DYE50_08575 | Q5WLE9 | + | 1982364 - 1983299 | 35294.9 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | DYE50_08580 | Q8R7B9 | + | 1983423 - 1984700 | 44828.1 |
| acetylglutamate kinase | DYE50_08585 | B0TCA8 | + | 1984720 - 1985622 | 32669.0 |
| plp-dependent cysteine synthase family protein | DYE50_08590 | Q7DDL5 | - | 1985658 - 1986638 | 35740.6 |
| hypothetical protein | DYE50_08595 | F4IEM5 | - | 1986680 - 1988143 | 54297.1 |
| pyridoxal phosphate-dependent aminotransferase | DYE50_08600 | Q08432 | - | 1988281 - 1989450 | 44551.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
