Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] reductase | DYE50_08405 | Q9PKF7 | + | 1926537 - 1927286 | 26252.7 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DYE50_08410 | O34340 | + | 1927319 - 1928563 | 43560.8 |
| beta-hydroxyacyl-acp dehydratase | DYE50_08415 | B9DY11 | + | 1928576 - 1929013 | 16316.6 |
| amino acid abc transporter substrate-binding protein | DYE50_08420 | P0AEN0 | + | 1929220 - 1930014 | 28653.2 |
| amino acid abc transporter permease | DYE50_08425 | P0AEQ8 | + | 1930023 - 1930682 | 24309.6 |
| amino acid abc transporter atp-binding protein | DYE50_08430 | P54537 | + | 1930704 - 1931456 | 27631.9 |
| hamp domain-containing protein | DYE50_08435 | Q55F68 | + | 1931661 - 1934057 | 88798.0 |
| hypothetical protein | DYE50_08440 | O83497 | + | 1934020 - 1936794 | 103038.0 |
| hypothetical protein | DYE50_08445 | Not Available | + | 1936784 - 1938292 | 56970.9 |
| hypothetical protein | DYE50_08450 | P0DJ97 | + | 1938317 - 1940422 | 79448.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
