Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf115 domain-containing protein | DYE50_08355 | O83743 | - | 1910509 - 1912449 | 71342.5 |
| pasta domain-containing protein | DYE50_08360 | Q03524 | - | 1912430 - 1914304 | 67856.0 |
| signal peptidase i | DYE50_08365 | Q5HHB9 | - | 1914295 - 1914831 | 19909.6 |
| m23 family peptidase | DYE50_08370 | P44693 | + | 1914895 - 1916076 | 42652.9 |
| hypothetical protein | DYE50_08375 | Not Available | + | 1916106 - 1916339 | 8734.34 |
| hypothetical protein | DYE50_08380 | P02963 | + | 1916342 - 1918618 | 85357.6 |
| hypothetical protein | DYE50_08385 | O31528 | + | 1918751 - 1922578 | 141048.0 |
| chorismate synthase | DYE50_08390 | C4ZAX1 | + | 1922670 - 1923773 | 38533.7 |
| d-alanyl-d-alanine carboxypeptidase | DYE50_08395 | P38422 | - | 1923770 - 1925350 | 58154.8 |
| acp s-malonyltransferase | DYE50_08400 | P71019 | + | 1925566 - 1926522 | 33636.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
