Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | DYE50_08305 | P19769 | - | 1901785 - 1902780 | 38965.9 |
| hypothetical protein | DYE50_08310 | Not Available | - | 1902732 - 1903145 | 16089.4 |
| rpn family recombination-promoting nuclease/putative transposase | DYE50_08315 | Not Available | - | 1903281 - 1904039 | 29444.9 |
| hypothetical protein | DYE50_08320 | Not Available | - | 1904331 - 1904573 | 8841.34 |
| hypothetical protein | DYE50_08325 | Not Available | - | 1904626 - 1905606 | 38101.7 |
| m15 family peptidase | DYE50_08330 | Not Available | + | 1905849 - 1906451 | 23016.2 |
| glycine--trna ligase | DYE50_08335 | Q73RR5 | + | 1906664 - 1908154 | 57647.0 |
| aldo/keto reductase | DYE50_08340 | P77735 | + | 1908158 - 1908922 | 28632.1 |
| hd domain-containing protein | DYE50_08345 | O50161 | - | 1908915 - 1910189 | 47790.8 |
| hypothetical protein | DYE50_08350 | Not Available | + | 1910241 - 1910441 | 7591.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
