Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | DYE50_08255 | Q9CIQ6 | - | 1873847 - 1874644 | 29446.1 |
| abc transporter permease | DYE50_08260 | Q9ZDG1 | - | 1874637 - 1875563 | 33196.1 |
| abc transporter substrate-binding protein | DYE50_08265 | Q9ZDG2 | + | 1875670 - 1876671 | 35112.0 |
| diguanylate cyclase | DYE50_08270 | Q8EGF8 | - | 1876910 - 1878250 | 51354.4 |
| parb/repb/spo0j family partition protein | DYE50_08275 | O83295 | - | 1878408 - 1879385 | 35873.6 |
| para family protein | DYE50_08280 | O83296 | - | 1879453 - 1880223 | 27959.8 |
| sam-dependent methyltransferase | DYE50_08285 | Q6DDT5 | + | 1880325 - 1881545 | 45312.7 |
| nad-dependent protein deacylase | DYE50_08290 | Q97MB4 | - | 1881542 - 1882279 | 27256.5 |
| hypothetical protein | DYE50_08295 | Not Available | + | 1882462 - 1887666 | 189863.0 |
| hypothetical protein | DYE50_08300 | Not Available | + | 1887892 - 1901235 | 482670.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
