Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | DYE50_08205 | O66107 | - | 1861749 - 1862381 | 23024.9 |
| tetratricopeptide repeat protein | DYE50_08210 | Not Available | + | 1862596 - 1863525 | 36049.2 |
| transcription elongation factor grea | DYE50_08215 | O83062 | + | 1863587 - 1866310 | 103922.0 |
| cation:proton antiporter | DYE50_08220 | Q58671 | + | 1866405 - 1867877 | 53321.4 |
| mgtc/sapb family protein | DYE50_08225 | P0AFV3 | + | 1867874 - 1868590 | 26568.7 |
| 5s ribosomal rna | Not Available | Not Available | + | 1868815 - 1868924 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 1869630 - 1869739 | Not Available |
| hypothetical protein | DYE50_08240 | Not Available | + | 1870281 - 1870580 | 11478.4 |
| ketol-acid reductoisomerase | DYE50_08245 | Q87TN4 | - | 1870687 - 1872165 | 54591.1 |
| duf1015 domain-containing protein | DYE50_08250 | Not Available | + | 1872531 - 1873850 | 48430.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
