Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DYE50_08105 | P0AFT0 | + | 1838918 - 1839982 | 40068.0 |
| hypothetical protein | DYE50_08110 | Not Available | + | 1840071 - 1841069 | 37099.7 |
| pbp1a family penicillin-binding protein | DYE50_08115 | Q5FAC7 | + | 1841272 - 1843824 | 94228.5 |
| aaa family atpase | DYE50_08120 | Q6GFF2 | + | 1843833 - 1845923 | 79093.0 |
| glycoside hydrolase | DYE50_08125 | O32258 | - | 1845920 - 1846933 | 38988.6 |
| hypothetical protein | DYE50_08130 | Not Available | - | 1846985 - 1847638 | 23689.0 |
| Trna-arg | Not Available | Not Available | + | 1847726 - 1847800 | Not Available |
| site-specific integrase | DYE50_08140 | Q8TZV9 | - | 1847859 - 1848806 | 37132.0 |
| hypothetical protein | DYE50_08145 | Not Available | - | 1848890 - 1849666 | 29034.5 |
| hypothetical protein | DYE50_08150 | O83306 | - | 1849683 - 1850360 | 24612.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
