Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | DYE50_08055 | Q73LF4 | - | 1827418 - 1829358 | 71246.7 |
| dna-directed rna polymerase subunit omega | DYE50_08060 | O83699 | - | 1829624 - 1829821 | 7504.97 |
| mbl fold metallo-hydrolase | DYE50_08065 | Q57544 | - | 1829877 - 1830827 | 35697.8 |
| single-stranded-dna-specific exonuclease recj | DYE50_08070 | O32044 | - | 1830983 - 1833133 | 79122.7 |
| eal domain-containing protein | DYE50_08075 | Q9I310 | + | 1833250 - 1835748 | 95119.7 |
| uridine phosphorylase | DYE50_08080 | O83990 | - | 1835850 - 1836638 | 28156.9 |
| dna repair protein reco | DYE50_08085 | A4J7D2 | - | 1836653 - 1837426 | 28524.4 |
| deoxyribose-phosphate aldolase | DYE50_08090 | Q8RB49 | - | 1837426 - 1838142 | 25196.3 |
| 4fe-4s dicluster domain-containing protein | DYE50_08095 | P0CY90 | + | 1838301 - 1838474 | 5733.74 |
| hypothetical protein | DYE50_08100 | Not Available | + | 1838490 - 1838915 | 15923.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
