Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transporter azld | DYE50_06200 | O07923 | - | 1376245 - 1376577 | 12361.0 |
| branched-chain amino acid transporter azlc | DYE50_06205 | O07942 | - | 1376558 - 1377283 | 26330.7 |
| cof-type had-iib family hydrolase | DYE50_06210 | P94592 | + | 1377372 - 1378136 | 27749.4 |
| cpbp family intramembrane metalloprotease | DYE50_06215 | Q6LZY8 | - | 1378133 - 1378909 | 29327.6 |
| had family hydrolase | DYE50_06220 | Q8DPQ3 | + | 1379024 - 1379752 | 28008.3 |
| winged helix-turn-helix transcriptional regulator | DYE50_06225 | Not Available | + | 1379841 - 1380368 | 19598.7 |
| hypothetical protein | DYE50_06230 | Not Available | + | 1380473 - 1380919 | 16818.5 |
| hypothetical protein | DYE50_06235 | Not Available | - | 1381332 - 1381883 | 20794.4 |
| hypothetical protein | DYE50_06240 | P65591 | + | 1381934 - 1382293 | 13772.6 |
| hypothetical protein | DYE50_06245 | Not Available | + | 1382670 - 1383569 | 34791.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
