Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmannosamine-6-phosphate 2-epimerase | DYE50_06050 | Not Available | - | 1354041 - 1354255 | 8509.07 |
| gnat family n-acetyltransferase | DYE50_06055 | Not Available | - | 1354339 - 1354533 | 7718.33 |
| ld-carboxypeptidase | DYE50_06060 | Q47511 | - | 1354643 - 1355689 | 39427.6 |
| competence protein tfox | DYE50_06065 | P22043 | - | 1355814 - 1356128 | 12077.7 |
| methyltransferase domain-containing protein | DYE50_06070 | E3H9W1 | - | 1356180 - 1356944 | 29598.1 |
| n-acetyltransferase | DYE50_06075 | P46543 | - | 1357028 - 1357510 | 18676.4 |
| hypothetical protein | DYE50_06080 | Not Available | - | 1357544 - 1358377 | 31867.0 |
| gnat family n-acetyltransferase | DYE50_06085 | Q87ND5 | + | 1358517 - 1359326 | 30809.0 |
| nudix domain-containing protein | DYE50_06090 | Not Available | + | 1359387 - 1359875 | 18813.4 |
| phzf family phenazine biosynthesis protein | DYE50_06095 | Q9I073 | + | 1359926 - 1360711 | 29339.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
