Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dabb family protein | DYE50_05650 | Q9SIP1 | + | 1294148 - 1294450 | 10929.2 |
| rec domain-containing phosphodiesterase | DYE50_05655 | Q9I310 | + | 1294514 - 1296178 | 62770.4 |
| hpt domain-containing protein | DYE50_05660 | Not Available | + | 1296175 - 1296510 | 12178.8 |
| response regulator | DYE50_05665 | Q8D5Z6 | + | 1296514 - 1298697 | 82248.7 |
| extracellular solute-binding protein | DYE50_05670 | Q00749 | + | 1298721 - 1300007 | 48895.1 |
| class i sam-dependent methyltransferase | DYE50_05675 | A8FKB3 | + | 1300085 - 1300837 | 29627.3 |
| hypothetical protein | DYE50_05680 | Not Available | - | 1300847 - 1301260 | 15440.8 |
| 2'-5' rna ligase family protein | DYE50_05685 | Not Available | + | 1301410 - 1301967 | 20834.1 |
| hypothetical protein | DYE50_05690 | Not Available | - | 1301975 - 1302184 | 7536.94 |
| hamp domain-containing protein | DYE50_05695 | P39209 | - | 1302274 - 1304364 | 75635.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
