Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DYE50_05400 | Not Available | - | 1253974 - 1254891 | 34980.9 |
| peptidase s58 family protein | DYE50_05405 | P9WM22 | - | 1254907 - 1255881 | 34074.7 |
| hypothetical protein | DYE50_05410 | O32222 | + | 1256056 - 1256400 | 12684.2 |
| heavy metal translocating p-type atpase | DYE50_05415 | O32220 | + | 1256410 - 1258977 | 90409.9 |
| hypothetical protein | DYE50_05420 | Q9JYM0 | + | 1258998 - 1260266 | 46725.8 |
| duf2318 domain-containing protein | DYE50_05425 | Not Available | + | 1260275 - 1260736 | 16724.0 |
| diguanylate cyclase | DYE50_05430 | O28017 | + | 1260811 - 1261338 | 19354.5 |
| trna threonylcarbamoyladenosine dehydratase | DYE50_05435 | O32037 | - | 1261342 - 1262127 | 29196.7 |
| fic family protein | DYE50_05440 | B4GJC1 | + | 1262317 - 1263210 | 34283.0 |
| site-specific dna-methyltransferase | DYE50_05445 | P34721 | - | 1263307 - 1264185 | 33862.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
