Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rrna (guanine-n2)-methyltransferase | DYE50_05115 | Q9JYY8 | - | 1205000 - 1206130 | 43458.2 |
| atp-dependent helicase | DYE50_05120 | B1KQF6 | + | 1206211 - 1207812 | 59917.7 |
| atp-binding cassette domain-containing protein | DYE50_05125 | O31716 | + | 1207856 - 1209496 | 62340.9 |
| response regulator | DYE50_05130 | P0C0F6 | + | 1209539 - 1212064 | 94876.9 |
| helix-turn-helix domain-containing protein | DYE50_05135 | Not Available | + | 1212367 - 1212837 | 17443.3 |
| is3 family transposase | DYE50_05140 | P16940 | + | 1212726 - 1213613 | 34331.3 |
| flavodoxin | DYE50_05145 | Q57746 | - | 1213732 - 1214166 | 16194.4 |
| peptidoglycan endopeptidase | DYE50_05150 | Not Available | - | 1214464 - 1215021 | 21151.0 |
| fluoride efflux transporter crcb | DYE50_05155 | Q1H1Z8 | - | 1215023 - 1215391 | 12646.2 |
| hypothetical protein | DYE50_05160 | Not Available | - | 1215539 - 1215721 | 7192.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
