Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema ruminis Ru1
Accession NumberCP031518.1
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DYE50_04965 | P46903 | + | 1177019 - 1177747 | 26698.2 |
| hypothetical protein | DYE50_04970 | O51693 | + | 1177750 - 1179927 | 81610.4 |
| hypothetical protein | DYE50_04975 | Not Available | + | 1180033 - 1181013 | 36993.6 |
| cpbp family intramembrane metalloprotease | DYE50_04980 | Not Available | - | 1181010 - 1181702 | 26348.1 |
| 3-isopropylmalate dehydratase small subunit | DYE50_04985 | Q6D0G5 | - | 1181883 - 1182416 | 20141.2 |
| 3-isopropylmalate dehydratase large subunit | DYE50_04990 | Q74BX5 | - | 1182448 - 1183734 | 46571.1 |
| d-2-hydroxyacid dehydrogenase | DYE50_04995 | C0CMQ8 | - | 1183784 - 1184776 | 36176.8 |
| cation transporter | DYE50_05000 | Not Available | - | 1184781 - 1184990 | 6955.27 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DYE50_05005 | Q73KZ3 | - | 1185061 - 1186116 | 38342.5 |
| hypothetical protein | DYE50_05010 | Not Available | - | 1186119 - 1187267 | 44391.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
