Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | SO_0528 | P54304 | + | 550874 - 551761 | 32957.3 |
| transcriptional activator of tryptophan biosynthesis trpi | SO_0529 | P34818 | - | 551821 - 552705 | 33202.5 |
| amino acid efflux protein rhtb family | SO_0530 | O05406 | + | 552805 - 553416 | 21918.5 |
| arsenite-sensing transcriptional repressor arsr | SO_0532 | Q88JD1 | + | 553908 - 554252 | 13082.1 |
| thioredoxin-coupled cytoplasmic arsenate reductase arsc2 | SO_0533 | P45947 | + | 554288 - 554803 | 18637.7 |
| arsenate permease acr3 family | SO_0534 | A6TP80 | + | 554813 - 555832 | 37062.8 |
| permease of unknown function duf318 | SO_0535 | Q58004 | + | 555874 - 556869 | 35849.0 |
| redox-active disulfide protein 2 | SO_0536 | Q58001 | + | 556879 - 557115 | 8488.37 |
| glyceraldehyde-3-phosphate dehydrogenase (nad+) gapa | SO_0538 | P58559 | + | 557306 - 558319 | 36853.3 |
| transport protein mfs superfamily | SO_0539 | Not Available | + | 558329 - 559591 | 45298.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
