Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-carbamoyl-putrescine amidase agub | SO_0888 | A4X490 | + | 917169 - 918875 | 60999.4 |
| issod1 transposase tnpa_issod1 | SO_0891 | P0CF79 | + | 920229 - 921388 | 44945.6 |
| pirin family protein | SO_0895 | Q9KKY1 | + | 923639 - 924496 | 31153.1 |
| atp-dependent rna helicase dbpa | SO_0897 | P21693 | + | 924809 - 926185 | 50411.0 |
| protein of unknown function upf0167 | SO_0898 | Q9I3H7 | - | 926280 - 926807 | 19569.1 |
| glyoxalase family protein | SO_0899 | Q02481 | - | 926866 - 927288 | 16397.5 |
| oxidoreductase aldo/keto reductase family | SO_0900 | P0A9T4 | - | 927436 - 928476 | 39134.6 |
| na-translocating nadh-quinone reductase subunit a nqra | SO_0902 | Q3IHR0 | + | 928930 - 930300 | 49636.8 |
| na-translocating nadh-quinone reductase subunit b nqrb | SO_0903 | Q15YQ5 | + | 930300 - 931532 | 44632.2 |
| na-translocating nadh-quinone reductase subunit c nqrc | SO_0904 | Q8ZBZ2 | + | 931522 - 932316 | 29059.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
