Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribulokinase | SO_0878 | P0AEX5 | - | 907976 - 908863 | 33221.7 |
| protein of unknown function upf0270 | SO_0879 | Not Available | - | 908948 - 909193 | 9166.86 |
| peptidase s33 family yhet | SO_0880 | P45524 | - | 909203 - 910186 | 36401.4 |
| predicted tat leader-containing periplasmic protein | SO_0881 | Not Available | + | 910298 - 910804 | 18907.0 |
| oxidoreductase gmc family | SO_0882 | P55582 | + | 910851 - 912452 | 57538.0 |
| glutathione-dependent formaldehyde-activating enzyme gfaa | SO_0883 | E1VBT6 | + | 912465 - 912875 | 15678.5 |
| protein of unknown function duf2390 | SO_0884 | Not Available | - | 912927 - 913388 | 17628.2 |
| reg family atpase yhes | SO_0885 | A0A0H2VBH0 | - | 913424 - 915337 | 71515.7 |
| putative metal-binding protein of unknown function duf2387 | SO_0886 | P0ADX0 | + | 915614 - 915814 | 7269.82 |
| agmatine deiminase agua | SO_0887 | Q8EIF2 | + | 915983 - 917095 | 40796.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
