Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na(+)-linked d-alanine glycine transporter glyp | SO_0858 | P44917 | + | 881216 - 882574 | 47664.3 |
| two component signal transduction system hybrid histidine kinase/response regulator with pas sensory domain | SO_0859 | Q9F8D7 | + | 882701 - 887998 | 197105.0 |
| two component signal transduction system response regulator with hd domain | SO_0860 | Q9HV27 | + | 888060 - 889076 | 37900.1 |
| folate-dependent protein involved in synthesis and repair of fes clusters ygfz | SO_0861 | Q87LM8 | - | 889184 - 890140 | 34925.7 |
| d-3-phosphoglycerate dehydrogenase sera | SO_0862 | P0A9T2 | - | 890275 - 891504 | 44316.5 |
| membrane protein of unknown function duf2238 yjdf | SO_0863 | P39270 | + | 891662 - 892267 | 22571.7 |
| transcriptional activator of curli operon csgd | SO_0864 | P0AF30 | + | 892638 - 893309 | 25336.1 |
| major curlin subunit csga | SO_0865 | Not Available | - | 893523 - 895031 | 52444.3 |
| minor curlin subunit csgb | SO_0866 | Not Available | - | 895046 - 895465 | 14811.6 |
| collagenolytic serine protease | SO_0867 | Q45670 | + | 895864 - 898371 | 86577.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
