Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative amino acid efflux permease rhtb family | SO_0765 | Q8Z3B3 | - | 778981 - 779685 | 24935.3 |
| transcriptional regulator arac family | SO_0766 | O31449 | - | 779788 - 780618 | 31652.9 |
| nad dependent epimerase/dehydratase family protein | SO_0768 | P71037 | + | 781957 - 782589 | 21956.2 |
| arginine-responsive transcriptional repressor of arginine metabolism argr | SO_0769 | Q8EIR6 | - | 782703 - 783173 | 16984.5 |
| nad dependent malate dehydrogenase mdh | SO_0770 | P82177 | + | 783465 - 784400 | 32139.2 |
| thiol-disulphide oxidoreductase dcc family | SO_0771 | Q8W485 | - | 784496 - 784885 | 14852.0 |
| dihydrofolate reductase folm | SO_0772 | A6T8N3 | + | 785081 - 785800 | 26296.6 |
| issod6 transposase tnpa_issod6 | SO_0773 | P50358 | + | 786013 - 786771 | 29247.3 |
| 5-formyltetrahydrofolate cyclo-ligase ygfa | SO_0774 | P0AC29 | - | 786827 - 787501 | 25048.3 |
| Ncrna_class:other | Not Available | Not Available | + | 787510 - 787689 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
