Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SO_0730 | Not Available | - | 743954 - 746044 | 81487.1 |
| issod3 transposase tnpa_issod3 | SO_0731 | Not Available | - | 746230 - 747444 | 46838.5 |
| thioredoxin-like protein | SO_0732 | P96695 | - | 747682 - 748029 | 12667.5 |
| cold-shock dna-binding domain protein | SO_0733 | P0A970 | - | 748237 - 748848 | 22391.7 |
| transcriptional repressor padr family | SO_0734 | C0H3Y4 | + | 749154 - 749510 | 13421.0 |
| predicted inner membrane protein | SO_0735 | Not Available | + | 749512 - 750462 | 35407.1 |
| predicted periplasmic protein | SO_0736 | P46149 | - | 750477 - 751271 | 30200.1 |
| tonb-dependent nickel receptor nict | SO_0737 | P76115 | + | 751569 - 753647 | 76957.5 |
| dyp-type heme-dependent peroxidase | SO_0740 | Q743F4 | - | 756464 - 757399 | 35762.2 |
| gamma-glutamyltransferase ggtb | SO_0741 | O05218 | - | 757617 - 759329 | 61530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
