Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| camp-responsive regulator of catabolite repression crp | SO_0624 | P0ACK0 | - | 650745 - 651380 | 23708.0 |
| periplasmic cyctochrome c oxidase regulatory protein | SO_0625 | Not Available | + | 651800 - 652579 | 28757.1 |
| 2'-5' rna ligase ligt | SO_0627 | P37025 | - | 652739 - 653296 | 20969.4 |
| bifunctional diguanylate cyclase/phosphodiesterase | SO_0628 | Q8EJM6 | + | 653468 - 655654 | 81743.9 |
| tonb-dependent copper receptor nosa | SO_0630 | P05825 | + | 655861 - 657867 | 74166.9 |
| atp-dependent helicase hrpb | SO_0632 | P37024 | + | 658076 - 660583 | 91414.2 |
| penicillin-binding protein 1b mrcb | SO_0633 | Q9KUC0 | + | 660661 - 662967 | 84803.0 |
| peptidyl-prolyl cis-trans isomerase ppic | SO_0635 | P0A9L7 | + | 663045 - 663323 | 10227.6 |
| toxin-antitoxin system toxin gnat family | SO_0636 | P55366 | - | 663421 - 663915 | 18409.0 |
| toxin-antitoxin system antidote rhh family | SO_0637 | P43995 | - | 663912 - 664187 | 9857.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
