Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacterioferritin-associated ferredoxin bfd | SO_0583 | P0A1Z7 | - | 608900 - 609091 | 6974.48 |
| chemotaxis signal transduction system methyl accepting sensory transducer with pas sensory domain | SO_0584 | Q9I3F6 | + | 609336 - 610910 | 57280.9 |
| d-isomer specific 2-hydroxyacid dehydrogenase family protein | SO_0585 | P0C1E9 | - | 610995 - 611930 | 34768.1 |
| membrane protein of unknown function duf3392 | SO_0586 | Not Available | + | 612020 - 612355 | 12720.1 |
| glycerophosphodiester phosphodiesterase | SO_0587 | O07592 | - | 612383 - 613105 | 26143.4 |
| small conductance mechanosensitive ion channel protein mscs family | SO_0588 | P39285 | - | 613121 - 616324 | 121651.0 |
| phosphatidylserine decarboxylase psd | SO_0590 | Q0HMP8 | - | 617296 - 618174 | 31886.6 |
| 30s ribosome assembly gtpase rsga | SO_0591 | Q8EJ79 | - | 618247 - 619311 | 38833.2 |
| 3'-5' oligoribonuclease orn | SO_0592 | Q8EJ78 | + | 619424 - 619969 | 20636.5 |
| Trna-gly | Not Available | Not Available | + | 620170 - 620245 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
