Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| periplasmic protein of unknown function duf2927 | SO_0540 | Not Available | + | 559698 - 560501 | 29990.6 |
| rna-metabolizing metallo-beta-lactamase family protein | SO_0541 | Q5SLP1 | + | 560619 - 562061 | 52960.0 |
| protein of unknown function duf1704 | SO_0542 | Not Available | - | 562105 - 563460 | 50693.7 |
| uncharacterized protein | SO_0543 | Not Available | - | 563977 - 564153 | 6755.01 |
| two component signal transduction system histidine kinase with chase and pas sensory domains | SO_0544 | P26489 | + | 564465 - 566618 | 81741.7 |
| two component signal transduction system response regulator | SO_4768 | Q55169 | + | 566615 - 567049 | 16541.2 |
| two component signal transduction system response regulator with diguanylate cyclase/phosphodiesterase acitivity | SO_0545 | Q9I310 | + | 567059 - 568780 | 64777.2 |
| ribosomal protein s6 glutaminyl transferase rimk | SO_0546 | Q8EJC1 | + | 568932 - 569837 | 32497.0 |
| putative outer membrane protein tigr02001 family | SO_0547 | Not Available | - | 569884 - 570576 | 25043.4 |
| histone-like dna-binding protein | SO_0548 | P0A1R9 | - | 570870 - 571142 | 9686.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
