Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase sirb | SO_0480 | Not Available | + | 504867 - 505307 | 16362.9 |
| cytochrome c maturation system peptidyl-prolyl cis-trans isomerase siri | SO_0481 | O08437 | + | 505401 - 506180 | 28323.1 |
| cytochrome c maturation system haem lyase subunit sirg | SO_0482 | P52223 | + | 506274 - 506948 | 24888.1 |
| 4fe-4s ferredoxin sirc | SO_0483 | P0AAK8 | + | 507035 - 507742 | 25396.7 |
| menaquinol oxidase sird | SO_0484 | P31077 | + | 507745 - 508692 | 33941.9 |
| abc-type copper uptake system periplasmic chaperone component nosl | SO_0485 | Q52529 | + | 508812 - 509303 | 18086.9 |
| abc-type copper transport system substrate-binding component nosd | SO_0486 | P19843 | + | 509314 - 510588 | 47000.4 |
| abc-type copper transport system atpase component nosf | SO_0487 | P19844 | + | 510585 - 511631 | 37613.0 |
| abc-type copper transport system permease component nosy | SO_0488 | Q9HYK9 | + | 511628 - 512524 | 32302.0 |
| transmembrane transcriptional regulator cadc family | SO_0490 | Not Available | + | 512738 - 514021 | 48493.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
