Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate uptake system substrate-binding component | SO_0456 | P0A3T3 | - | 482441 - 483397 | 33534.4 |
| uncharacterized protein | SO_0458 | Not Available | - | 483920 - 484042 | 4595.77 |
| putative atpase duf853 family | SO_0459 | P39342 | - | 484360 - 485841 | 53762.1 |
| uncharacterized protein | SO_0461 | Not Available | + | 486312 - 486545 | 8625.49 |
| predicted inner membrane protein | SO_0462 | Not Available | + | 486558 - 486983 | 14991.9 |
| neutral zinc metallopeptidase family protein | SO_0463 | P64431 | + | 487031 - 487909 | 31565.3 |
| nudix family hydrolase | SO_0464 | P46351 | + | 487944 - 488351 | 15196.0 |
| toxin-antitoxin system antidote | SO_0466 | Not Available | + | 489395 - 489943 | 20540.2 |
| toxin module of toxin-antitoxin system yafo family | SO_4763 | Not Available | + | 489965 - 490372 | 15635.4 |
| dna helicase ii uvrd | SO_0467 | P03018 | + | 490778 - 492946 | 81695.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
