Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase acnb | SO_0432 | P36683 | + | 455781 - 458378 | 93398.5 |
| regulator of sigma d rsd | SO_0433 | A1JII9 | - | 458544 - 459029 | 18548.9 |
| uroporphyrinogen decarboxylase heme | SO_0435 | Q8EJM8 | + | 459488 - 460552 | 39238.3 |
| signalling protein with pas ggdef and eal domains | SO_0437 | Q8EJM6 | + | 461212 - 463782 | 95812.3 |
| oxidoreductase short chain dehydrogenase/reductase family | SO_0438 | Q8T197 | + | 463858 - 464661 | 28411.9 |
| uncharacterized protein | SO_0439 | Not Available | - | 464658 - 464879 | 8253.55 |
| impa-like cell surface immunomodulating metalloprotease | SO_0440 | Q9I5W4 | - | 465031 - 468252 | 116817.0 |
| phosphoribosylamine-glycine ligase purd | SO_0441 | Q9KV81 | - | 468431 - 469729 | 45541.0 |
| bifunctional imp cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase purh | SO_0442 | Q8EJM1 | - | 469792 - 471423 | 58224.6 |
| zinc and cadmium (ii) responsive transcriptional activator zntr | SO_0443 | P0ACS6 | + | 471759 - 472250 | 17835.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
