Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ampd signaling modulator ampe | SO_0422 | P0AE14 | + | 436278 - 437129 | 31402.6 |
| transcriptional repressor of pyruvate metabolism pdhr | SO_0423 | P0ACM1 | + | 437567 - 438319 | 28262.2 |
| pyruvate dehydrogenase e1 component acee | SO_0424 | P0AFG9 | + | 438401 - 441067 | 99393.1 |
| dihydrolipoamide acetyltransferase acef | SO_0425 | P06959 | + | 441080 - 443113 | 69402.6 |
| dihydrolipoamide dehydrogenase lpda | SO_0426 | P0A9P2 | + | 443263 - 444690 | 50539.3 |
| bifunctional diguanylate cyclase / phosphodiesterase with pas sensory domain | SO_0427 | Q9I310 | + | 444829 - 449304 | 169109.0 |
| bifunctional outer membrane translocase / extracellular lipase plpd | SO_0428 | O34731 | + | 449535 - 451745 | 81129.4 |
| cell surface zinc endopeptidase pepo | SO_0429 | B2RQR8 | + | 451967 - 454009 | 76202.1 |
| putative periplasmic protein of unknown function duf2845 | SO_0430 | Not Available | - | 454327 - 454653 | 12342.8 |
| 2-deoxyglucose-6-phosphate hydrolase ynic | SO_0431 | Q7ADF8 | - | 454706 - 455359 | 23863.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
