Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 7,8-dihydro-8-oxoguanine-triphosphatase mutt | SO_0410 | P08337 | - | 426745 - 427137 | 14634.5 |
| putative zinc-binding protein of unknown function duf329 yacg | SO_0411 | Q8EJQ1 | - | 427225 - 427434 | 7887.33 |
| protein of unknown function duf1342 yacf | SO_0412 | Q8EJQ0 | - | 427495 - 428229 | 28689.1 |
| dephospho-coa kinase coae | SO_0413 | Q8EJP9 | - | 428222 - 428839 | 22924.4 |
| type iv prepilin peptidase pild | SO_0414 | P45794 | - | 428993 - 429919 | 34391.8 |
| type iv pilus inner membrane protein pilc | SO_0415 | P45793 | - | 430085 - 431356 | 46067.2 |
| type iv pilus assembly atpase pilb | SO_0416 | P45792 | - | 431608 - 433317 | 62779.0 |
| type iv pilin protein pila | SO_0417 | Q07564 | - | 433391 - 433807 | 13894.7 |
| nicotinate-nucleotide pyrophosphorylase nadc | SO_0419 | P30012 | - | 434288 - 435169 | 31757.2 |
| n-acetyl-anhydromuramyl-l-alanine amidase ampd | SO_0421 | P82974 | + | 435463 - 436008 | 20427.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
