Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative quinol monooxygenase | SO_0400 | P73602 | - | 414182 - 414466 | 10644.6 |
| putative nadph-dependent quinone oxidoreductase | SO_0401 | Q5HM44 | - | 414463 - 415476 | 36309.8 |
| transcriptional regulator lysr family | SO_0402 | P45463 | + | 415596 - 416525 | 34565.6 |
| predicted outer membrane protein | SO_0403 | Not Available | + | 417311 - 418180 | 33667.4 |
| zinc dependent metalloprotease domain lipoprotein | SO_0404 | Not Available | + | 418203 - 421661 | 128786.0 |
| transcription termination factor rho | SO_0405 | P0AG32 | - | 421774 - 423039 | 47164.1 |
| thioredoxin 1 trxa | SO_0406 | P0AA27 | - | 423252 - 423578 | 11889.3 |
| atp-dependent rna helicase rhlb | SO_0407 | Q8EJQ5 | + | 423730 - 425049 | 49265.1 |
| guanosine pentaphosphate phosphatase gppa | SO_0408 | B5FF86 | + | 425050 - 425970 | 33193.7 |
| thioredoxin family protein | SO_0409 | Q5UR29 | - | 426070 - 426606 | 19904.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
