Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i rm locus fic family protein | SO_0381 | Not Available | - | 394897 - 395895 | 37517.9 |
| type i restriction-modification system restriction endonuclease dna specificity subunit hsds | SO_0382 | Q57594 | - | 395983 - 397302 | 49591.9 |
| type i restriction-modification system n6-adenine dna methyltransferase hsdm | SO_0383 | Q60297 | - | 397292 - 399121 | 69151.8 |
| protein of unknown function duf3296 | SO_0384 | Not Available | - | 399550 - 400245 | 27022.5 |
| transcriptional regulator alpa family | SO_4831 | Not Available | - | 400329 - 400553 | 8920.05 |
| excisionase/response regulator inhibitor-like protein | SO_0386 | P12552 | - | 400540 - 400788 | 9596.49 |
| uncharacterized protein | SO_0387 | Not Available | - | 400896 - 401720 | 31898.5 |
| integrase bacteriophage p4 family | SO_0388 | P06155 | + | 402011 - 403300 | 48455.4 |
| uncharacterized protein | SO_0389 | Not Available | + | 403332 - 403895 | 21760.2 |
| excisionase/response regulator inhibitor-like protein | SO_0390 | Not Available | + | 403903 - 404178 | 10455.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
