Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional ppgpp phosphohydrolase/gtp diphosphokinase spot | SO_0359 | Q9KNM2 | - | 368255 - 370360 | 78790.3 |
| dna-directed rna polymerase omega subunit rpoz | SO_0360 | Q8EJU7 | - | 370404 - 370682 | 10125.2 |
| guanylate kinase gmk | SO_0361 | Q8EJU6 | - | 370741 - 371364 | 22993.2 |
| predicted inner membrane protein | SO_0362 | Not Available | + | 372003 - 373493 | 53822.8 |
| nucleoside-diphosphate-sugar pyrophosphorylase | SO_0363 | Not Available | + | 373652 - 374533 | 32007.6 |
| phosphotransferase enzyme family protein | SO_0364 | E8MF12 | + | 374541 - 375581 | 39190.1 |
| transport protein mfs superfamily | SO_0365 | Not Available | + | 375687 - 377111 | 53068.2 |
| p-loop containing nucleotide triphosphate hydrolase | SO_0366 | Not Available | - | 377127 - 377945 | 30544.5 |
| fic family protein | SO_0367 | A0A061I403 | + | 378250 - 379365 | 41795.0 |
| type iii restriction-modification system restriction subunit res | SO_0368 | Q06683 | + | 379586 - 382753 | 119891.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
