Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase cytochrome b subunit fdhc | SO_4511 | P0AEK8 | + | 4704007 - 4705035 | 37861.7 |
| fnr-inducible formate dehydrogenase accessory protein fdhx | SO_4512 | Not Available | + | 4705415 - 4705615 | 6937.18 |
| fnr-inducilble formate dehydrogenase molybdopterin-binding subunit fdha | SO_4513 | Q727P3 | + | 4705633 - 4708485 | 105450.0 |
| fnr-inducible formate dehydrogenase fes subunit fdhb | SO_4514 | P27273 | + | 4708515 - 4709084 | 20492.5 |
| fnr-inducible formate dehydrogenase cytochrome b subunit fdhc | SO_4515 | P0AEK8 | + | 4709161 - 4710144 | 36442.0 |
| tonb-dependent siderophore receptor | SO_4516 | A5F661 | - | 4710231 - 4712288 | 75405.9 |
| sodium-dependent transporter bass family | SO_4519 | Q8ZKL0 | - | 4713124 - 4714050 | 32685.8 |
| coproporphyrinogen iii oxidase oxygen-independent | SO_4520 | P54304 | + | 4714415 - 4715752 | 50893.6 |
| rad51 domain protein | SO_4521 | Not Available | + | 4715870 - 4716103 | 8449.22 |
| putative periplasmic protein | SO_4522 | Not Available | + | 4716134 - 4717075 | 35155.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
