Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted periplasmic protein | SO_4470 | Not Available | + | 4658945 - 4659478 | 19598.6 |
| nitrogen-responsive two component signal transduction system histidine kinase with pas sensory domain glnl | SO_4471 | P19906 | + | 4659600 - 4660646 | 38564.5 |
| nitrogen-responsive two component signal transduction system sigma54-dependent response regulator glng | SO_4472 | P0AFB9 | + | 4660684 - 4662099 | 52175.6 |
| autotransporter | SO_4473 | Q52866 | - | 4662169 - 4662735 | 20087.4 |
| cadmium and zinc efflux pump fief | SO_4475 | A6TGB7 | - | 4663358 - 4664248 | 32457.2 |
| periplasmic stress adaptor protein cpxp | SO_4476 | C6ECL5 | - | 4664299 - 4664790 | 18470.1 |
| periplasmic stress-responsive two component signal transduction system response regulator cpxr | SO_4477 | P0AE89 | + | 4665134 - 4665820 | 25928.8 |
| periplasmic stress-responsive two component signal transduction system histidine kinase cpxa | SO_4478 | P0AE84 | + | 4665835 - 4667184 | 50643.1 |
| sigma54 dependent transcriptional regulator with gaf sensory domain fis family | SO_4479 | P28614 | - | 4667262 - 4669112 | 68739.8 |
| nad+-dependent acetaldehyde dehydrogenase exac | SO_4480 | Q9ZAA1 | + | 4669480 - 4671000 | 55389.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
