Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter dcub | SO_4417 | P0ABP1 | + | 4609217 - 4610560 | 48083.4 |
| chap domain protein | SO_4418 | Q9GT49 | + | 4610773 - 4611438 | 25378.1 |
| uncharacterized protein | SO_4419 | Not Available | + | 4611442 - 4612023 | 22069.9 |
| subfamily m23b unassigned peptidase | SO_4420 | O32130 | + | 4612047 - 4612559 | 18861.8 |
| rk-rich protein of unknown function duf2986 | SO_4421 | Not Available | - | 4612563 - 4612745 | 6720.19 |
| tonb-dependent ferric achromobactin receptor | SO_4422 | Q6U607 | + | 4613050 - 4615224 | 79742.7 |
| diguanylate cyclase | SO_4425 | Q8Z5R0 | + | 4615937 - 4617115 | 44511.1 |
| trna pseudouridylate synthase | SO_4426 | P43930 | - | 4617120 - 4617806 | 25769.9 |
| two component signal transduction system histidine kinase | SO_4427 | Q5HR29 | - | 4617839 - 4619095 | 46654.5 |
| two component signal transduction system response regulator ompr family | SO_4428 | P0AD00 | - | 4619145 - 4619822 | 25412.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
