Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | SO_4368 | A6QC97 | + | 4563337 - 4563591 | 9250.98 |
| acyl carrier protein | SO_4369 | Q8XSU8 | + | 4563601 - 4563849 | 9202.97 |
| membrane protein | SO_4370 | Not Available | + | 4563849 - 4564397 | 20313.9 |
| amp-dependent synthetase and ligase family protein | SO_4371 | M4IQR7 | + | 4564394 - 4565758 | 50855.1 |
| thioester dehydrase family protein | SO_4372 | Q6AJ07 | + | 4565751 - 4566125 | 13545.1 |
| glycosyl transferase family 2 | SO_4373 | A2EK20 | + | 4566122 - 4567942 | 69136.0 |
| phenylalanine/tyrosine ammonia-lyase | SO_4374 | P42357 | + | 4567939 - 4569504 | 56988.6 |
| acyl-coa thioester hydrolase, ybgc/ybaw family in fatty acid biosynthesis locus | SO_4375 | Q45061 | + | 4569501 - 4569935 | 16889.4 |
| uncharacterized protein | SO_4376 | Not Available | + | 4569932 - 4570762 | 30159.4 |
| mmpl family efflux pump permease component | SO_4377 | A0A0H3KP92 | + | 4570762 - 4573266 | 89224.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
