Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 4512362 - 4512438 | Not Available |
| bifunctional diguanylate cyclase/phosphodiesterase with gaf sensory domain | SO_4324 | Q9I310 | + | 4512645 - 4515275 | 100054.0 |
| atp-dependent dna helicase rep | SO_4325 | P09980 | - | 4515501 - 4517516 | 77353.0 |
| transcriptional repressor of multidrug/detergent efflux pump vexr | SO_4326 | P44923 | + | 4517842 - 4518408 | 21365.8 |
| rnd-type multidrug/detergent efflux system mfp component vexb | SO_4327 | Q57500 | + | 4518434 - 4519552 | 41040.8 |
| rnd-type multidrug/detergent efflux system permease component vexa | SO_4328 | Q57124 | + | 4519566 - 4522655 | 111064.0 |
| protein of unknown function duf526 | SO_4329 | Q8ZLY9 | + | 4522772 - 4523026 | 9739.77 |
| uncharacterized protein | SO_4330 | Not Available | + | 4523195 - 4523527 | 12608.7 |
| predicted membrane protein | SO_4331 | Not Available | + | 4523587 - 4523943 | 13508.8 |
| protein of unknown function duf1006 ycaq | SO_4332 | P75843 | - | 4523940 - 4525106 | 45276.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
